STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003213Uncharacterized protein. (540 aa)    
Predicted Functional Partners:
PRPF4_1
U4/U6 small nuclear ribonucleoprotein Prp4.
   
 0.990
PRPF4_2
U4/U6 small nuclear ribonucleoprotein Prp4.
   
 0.990
PRP31_2
U4/U6-U5 snRNP complex subunit prp31.
   
 0.986
SNU13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.977
PRP31_1
U4/U6-U5 snRNP complex subunit prp31.
   
 0.975
LSM2
U6 snRNA-associated Sm-like protein LSm2.
    
 0.972
CYP3
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.972
CU098_001841
WD_REPEATS_REGION domain-containing protein.
   
 0.971
CU098_005928
Uncharacterized protein.
   
 0.970
CU098_009547
Uncharacterized protein.
   
 0.970
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (36%) [HD]