STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL44_140s ribosomal protein L44e; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)    
Predicted Functional Partners:
CRP79
Poly(A) binding protein Crp79.
   
 0.993
RPL5
60S ribosomal protein L5.
   
 0.993
RPL36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.992
CU098_012074
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
   
 0.992
CU098_013795
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.992
RPL28_3
60S ribosomal protein L28.
   
 0.991
RPL32
60S ribosomal protein L32.
   
 0.990
RPL7
60S ribosomal protein L7.
   
 0.990
RPL35
60S ribosomal protein L35.
   
 0.989
CU098_000033
Ribosomal_L16 domain-containing protein.
  
 0.988
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.