STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DSK1_1Serine/threonine protein kinase, CMGC group; Belongs to the protein kinase superfamily. (493 aa)    
Predicted Functional Partners:
CU098_011202
RRM domain-containing protein.
    
 0.985
CU098_010956
RRM domain-containing protein.
    
 0.944
CEF1_1
Pre-mRNA-splicing factor cef1.
    
   0.891
CEF1_2
Pre-mRNA-splicing factor cef1.
    
   0.891
CU098_000524
RRM domain-containing protein.
    
 0.889
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.813
CU098_013713
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.813
SNRNP35_1
Small nuclear ribonucleoprotein 35kDa (U11 U12).
    
 0.807
SNRNP35_2
Small nuclear ribonucleoprotein 35kDa (U11 U12).
    
 0.807
CU098_008826
Uncharacterized protein.
    
 0.804
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.