Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
UBC6_2Ubiquitin-conjugating enzyme E2 6. (229 aa)    
Predicted Functional Partners:
UBC7
Ubiquitin-conjugating enzyme E2 7; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.982
PTR3_1
SPS-sensor component ptr3; Belongs to the ubiquitin-activating E1 family.
    
 0.913
PTR3_2
SPS-sensor component ptr3; Belongs to the ubiquitin-activating E1 family.
    
 0.913
CRP79
Poly(A) binding protein Crp79.
    
  0.907
NEDD8
Nedd8-conjugating enzyme UBE2F.
    
 0.898
CU098_012679
Ubiquitin-like domain-containing protein.
    
 0.898
CU098_002095
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.874
ATG7_2
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.868
ATG7_1
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
    
 0.868
UBC13
Ubiquitin-conjugating enzyme 13; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.867
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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