STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000063Uncharacterized protein. (316 aa)    
Predicted Functional Partners:
CU098_000994
CID domain-containing protein.
    
 0.936
SMD3
Small nuclear ribonucleoprotein Sm D3.
    
 0.795
CU098_011094
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.791
CU098_009162
RRM domain-containing protein.
    
 0.771
CU098_010143
Uncharacterized protein.
    
 0.771
CU098_006077
Uncharacterized protein.
    
  0.759
CU098_003509
GRIP domain-containing protein.
    
 0.748
PHF5A
PHD finger-like domain-containing protein 5A.
    
  0.743
CU098_004985
Uncharacterized protein.
    
 0.733
CU098_010275
Uncharacterized protein.
    
 0.733
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.