STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005587Uncharacterized protein. (539 aa)    
Predicted Functional Partners:
ERG3_2
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.972
ERG3_1
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.972
CU098_000385
Uncharacterized protein.
 
 
 0.954
CU098_010175
Amino_oxidase domain-containing protein.
 
 
 0.954
ERG27
3-keto-steroid reductase.
   
 
 0.908
CU098_009462
Uncharacterized protein.
   
 
 0.908
COQ1
Coq1 putative hexaprenyl diphosphate synthase.
  
 0.886
BTS1
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.886
CU098_004403
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.859
CU098_003768
Epimerase domain-containing protein.
  
 
 0.848
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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