STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_005179Uncharacterized protein. (798 aa)    
Predicted Functional Partners:
CU098_008449
SH3 domain-containing protein.
   
 0.745
CU098_007783
SH3 domain-containing protein.
   
 0.745
RAS1_1
Ras GTPase.
  
 
 0.716
CU098_007067
Uncharacterized protein.
    
 0.705
PTPN11
Protein tyrosine phosphatase, non-receptor type 11.
    
 0.705
CU098_013273
Uncharacterized protein.
    
 0.705
RAS1_3
Ras GTPase.
  
 
 0.703
CD2AP
SH3-domain kinase binding protein 1.
    
  0.652
RAS1_2
Ras GTPase.
    
 0.643
RAS1_4
Ras GTPase.
    
 0.643
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.