Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PEX19_1Peroxisome chaperone and import receptor. (281 aa)    
Predicted Functional Partners:
PEX11_2
Peroxisomal membrane protein PMP27.
   
 0.959
PEX11_1
Peroxisomal membrane protein PMP27.
   
 0.959
CU098_010516
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 0.956
CU098_008142
Uncharacterized protein.
    
 0.950
ABCD3
ATP-binding cassette sub-D member 3.
    
 0.950
CU098_004702
Pex14_N domain-containing protein.
   
 0.947
CU098_006954
Uncharacterized protein.
   
 0.947
CU098_010281
Uncharacterized protein.
   
 0.947
PEX14
Peroxisomal membrane protein pex14.
   
 0.947
PEX13_1
Peroxisomal membrane protein PAS20.
    
 0.946
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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