STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_003603C3H1-type domain-containing protein. (403 aa)    
Predicted Functional Partners:
CU098_002559
Uncharacterized protein.
    
 
 0.940
CBC2_1
Nuclear cap-binding protein subunit 2.
    
 
 0.727
CBC2_2
Nuclear cap-binding protein subunit 2.
    
 
 0.727
SUB2
Suppressor of the cold-sensitive snRNP bioproteinsis mutant brr1-1.
    
 
 0.697
MEX67_2
Nuclear mRNA export, poly(A)+RNA binding protein.
    
 
 0.651
MEX67_1
Nuclear mRNA export, poly(A)+RNA binding protein.
    
 
 0.651
CU098_003173
Uncharacterized protein.
    
 
 0.591
CU098_000173
Uncharacterized protein.
    
 
 0.591
CU098_000174
Importin N-terminal domain-containing protein.
    
 
 0.591
TNPO1
Transportin-1.
    
 
 0.591
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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