STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKN7_1Kinase-regulated stress-responsive transcription factor skn7. (368 aa)    
Predicted Functional Partners:
SIR2
NAD-dependent histone deacetylase sir2.
    
 0.653
CU098_007602
Uncharacterized protein.
    
 0.640
CU098_008964
HATPase_c domain-containing protein.
    
 0.640
HSP90_1
Heat shock protein 90.
    
 0.635
CU098_000871
Uncharacterized protein.
    
 0.635
TRAP1_1
TNF receptor-associated protein 1, mitochondrial.
    
 0.635
HSP90_3
Heat shock protein 90.
    
 0.635
TRAP1_2
TNF receptor-associated protein 1, mitochondrial.
    
 0.635
CU098_013067
Flavin_Reduct domain-containing protein.
    
 0.635
HSP90_2
Heat shock protein 90.
    
 0.635
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.