STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000392ABC transporter domain-containing protein. (358 aa)    
Predicted Functional Partners:
GCN1_1
Translational activator of GCN4.
   
 
 0.910
GCN1_2
Translational activator of GCN4.
   
 
 0.910
CU098_012861
ABC transporter domain-containing protein.
 
 
 
0.857
RPL35
60S ribosomal protein L35.
  
 
 0.771
RPL5
60S ribosomal protein L5.
  
   0.766
MRPL39_1
54S ribosomal protein L39, mitochondrial.
  
 
 0.757
CU098_008268
Uncharacterized protein.
  
   0.752
EIF2S3
Eukaryotic translation initiation factor 2 subunit 3.
   
 0.750
CU098_003874
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.747
CU098_001703
Uncharacterized protein.
  
   0.745
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.