Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_006399Uncharacterized protein. (199 aa)    
Predicted Functional Partners:
CU098_009486
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
      0.806
NOB1
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 
 0.656
CU098_007894
Uncharacterized protein.
   
  
 0.577
TRM1
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.569
CU098_000199
Uncharacterized protein.
      
 0.548
CU098_011539
RRF domain-containing protein.
      
 0.548
CU098_003782
ATPase_AAA_core domain-containing protein.
      
 0.538
CU098_013546
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.535
ALG6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.532
RAB22A
Ras-protein Rab-22A.
      
 0.531
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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