Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CU098_005640Protein kinase domain-containing protein. (156 aa)    
Predicted Functional Partners:
CU098_002194
Protein kinase domain-containing protein.
 
     0.947
CU098_002016
Protein kinase domain-containing protein.
 
     0.943
CU098_009188
Protein kinase domain-containing protein.
 
     0.931
CU098_000669
Protein kinase domain-containing protein.
 
     0.921
DCAF7
Ddb1 and cul4 associated factor 7.
   
 
 0.817
CU098_006748
Rho-GAP domain-containing protein.
    
 
 0.747
CU098_007494
Uncharacterized protein.
    
 
 0.747
CU098_006115
Ubiquitin-like domain-containing protein.
    
 0.685
UBC9
E2 SUMO-conjugating protein ubc9.
    
 0.600
PIN1
Peptidyl-prolyl cis-trans isomerase.
    
  0.583
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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