STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HRR25_1Serine/threonine protein kinase. (586 aa)    
Predicted Functional Partners:
CU098_002195
Photolyase/cryptochrome alpha/beta domain-containing protein.
    
 0.961
NOB1
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.929
WC1_1
Blue light receptor.
    
 0.922
WC1_2
Blue light receptor.
    
 0.922
CU098_010059
Uncharacterized protein.
    
 0.918
CU098_013708
Uncharacterized protein.
    
 0.918
CU098_006395
RIO domain-containing protein.
   
 0.915
CU098_010709
RIO domain-containing protein.
   
 0.915
CSNK1A1_2
Casein kinase I isoform alpha; Belongs to the protein kinase superfamily.
   
  0.913
CU098_010898
Bms1-type G domain-containing protein.
    
 0.912
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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