STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRP45_1mRNA splicing protein. (590 aa)    
Predicted Functional Partners:
CRNKL1
Crooked neck-like protein 1.
  
 0.976
BUD31
Component of the SF3b subcomplex of the U2 snRNP.
   
 0.976
CLF1
NineTeen Complex (NTC) component.
  
 0.976
ISY1
NineTeen Complex (NTC) component.
    
 0.973
RBM22
RNA binding motif protein 22.
   
 0.971
CU098_000278
Uncharacterized protein.
    
 0.965
CU098_002193
WD_REPEATS_REGION domain-containing protein.
   
 0.965
SYF1_1
Pre-mRNA-splicing factor syf1.
   
 0.964
SYF1_2
Pre-mRNA-splicing factor syf1.
   
 0.964
CWC22_1
Pre-mRNA-splicing factor cwc22.
   
 0.951
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.