STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_010333BTB domain-containing protein. (115 aa)    
Predicted Functional Partners:
UBC9
E2 SUMO-conjugating protein ubc9.
    
 
 0.738
UBC12
NEDD8-conjugating protein ubc12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.702
CAND1
Cullin-associated NEDD8-dissociated protein 1.
     
  0.669
CU098_004432
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.651
CU098_003320
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.651
CU098_009343
Cullin domain-containing protein; Belongs to the cullin family.
    
 0.651
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.651
COPS2
COP9 signalosome complex subunit 2.
     
  0.604
CU098_000943
E2_bind domain-containing protein.
     
  0.601
GPS1
Cop9 signalosome complex subunit.
     
  0.596
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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