DUS3L protein (Rhizopus stolonifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DUS3L

tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs. (624 aa)

Predicted Functional Partners:

TRM1

0.850

CU098_009841

0.840

PUS1

0.840

NOP2

0.812

TRM8_2

0.797

TRM8_1

0.797

TRM61_1

0.785

TRM61_2

0.785

ERB1_2

0.774

ERB1_1

0.774

Your Current Organism:

Rhizopus stolonifer

NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU098_009841	DUS3L	A0A367KPJ3	A0A367JS64	Uncharacterized protein.	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	0.840
CU098_009841	ERB1_1	A0A367KPJ3	A0A367J6B6	Uncharacterized protein.	Ribosome bioproteinsis protein erb1.	0.600
CU098_009841	ERB1_2	A0A367KPJ3	A0A367IZS0	Uncharacterized protein.	Ribosome bioproteinsis protein erb1.	0.600
CU098_009841	NOP2	A0A367KPJ3	A0A367KGK9	Uncharacterized protein.	rRNA (Cytosine-C5-)-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.684
CU098_009841	TRM1	A0A367KPJ3	A0A367JAC6	Uncharacterized protein.	tRNA (guanine(26)-N(2))-dimethyltransferase.	0.701
CU098_009841	TRM61_1	A0A367KPJ3	A0A367IV54	Uncharacterized protein.	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.655
CU098_009841	TRM61_2	A0A367KPJ3	A0A367KWW1	Uncharacterized protein.	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.655
CU098_009841	TRM8_1	A0A367KPJ3	A0A367KVZ5	Uncharacterized protein.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.702
CU098_009841	TRM8_2	A0A367KPJ3	A0A367KLH5	Uncharacterized protein.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.702
DUS3L	CU098_009841	A0A367JS64	A0A367KPJ3	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	Uncharacterized protein.	0.840
DUS3L	ERB1_1	A0A367JS64	A0A367J6B6	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	Ribosome bioproteinsis protein erb1.	0.774
DUS3L	ERB1_2	A0A367JS64	A0A367IZS0	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	Ribosome bioproteinsis protein erb1.	0.774
DUS3L	NOP2	A0A367JS64	A0A367KGK9	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	rRNA (Cytosine-C5-)-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.812
DUS3L	PUS1	A0A367JS64	A0A367KSZ8	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA pseudouridine synthase 1.	0.840
DUS3L	TRM1	A0A367JS64	A0A367JAC6	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA (guanine(26)-N(2))-dimethyltransferase.	0.850
DUS3L	TRM61_1	A0A367JS64	A0A367IV54	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.785
DUS3L	TRM61_2	A0A367JS64	A0A367KWW1	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.	0.785
DUS3L	TRM8_1	A0A367JS64	A0A367KVZ5	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.797
DUS3L	TRM8_2	A0A367JS64	A0A367KLH5	tRNA-dihydrouridine(47) synthase [NAD(P)(+)]; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs. Specifically modifies U47 in cytoplasmic tRNAs.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.797
ERB1_1	CU098_009841	A0A367J6B6	A0A367KPJ3	Ribosome bioproteinsis protein erb1.	Uncharacterized protein.	0.600

page 1 of 6

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About