CU098_006070 protein (Rhizopus stolonifer) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CU098_006070

Uncharacterized protein. (308 aa)

Predicted Functional Partners:

CU098_006898

0.832

TOM40

0.787

CU098_005006

0.780

CU098_010823

0.780

CU098_001057

0.780

CU098_007519

0.753

CU098_003550

0.699

CU098_007987

0.699

CU098_009582

0.699

CU098_002345

0.648

Your Current Organism:

Rhizopus stolonifer

NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CU098_001057	CU098_003550	A0A367KW61	A0A367J744	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_001057	CU098_005006	A0A367KW61	A0A367IIX0	Uncharacterized protein.	Uncharacterized protein.	0.942
CU098_001057	CU098_006070	A0A367KW61	A0A367JSG2	Uncharacterized protein.	Uncharacterized protein.	0.780
CU098_001057	CU098_006898	A0A367KW61	A0A367JD48	Uncharacterized protein.	Uncharacterized protein.	0.898
CU098_001057	CU098_007987	A0A367KW61	A0A367J870	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_001057	CU098_009582	A0A367KW61	A0A367KSR0	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_002345	CU098_006070	A0A367IS19	A0A367JSG2	Metalloenzyme domain-containing protein.	Uncharacterized protein.	0.648
CU098_003550	CU098_001057	A0A367J744	A0A367KW61	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_003550	CU098_005006	A0A367J744	A0A367IIX0	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_003550	CU098_006070	A0A367J744	A0A367JSG2	Uncharacterized protein.	Uncharacterized protein.	0.699
CU098_003550	CU098_006898	A0A367J744	A0A367JD48	Uncharacterized protein.	Uncharacterized protein.	0.869
CU098_003550	CU098_010823	A0A367J744	A0A367K060	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_005006	CU098_001057	A0A367IIX0	A0A367KW61	Uncharacterized protein.	Uncharacterized protein.	0.942
CU098_005006	CU098_003550	A0A367IIX0	A0A367J744	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_005006	CU098_006070	A0A367IIX0	A0A367JSG2	Uncharacterized protein.	Uncharacterized protein.	0.780
CU098_005006	CU098_006898	A0A367IIX0	A0A367JD48	Uncharacterized protein.	Uncharacterized protein.	0.898
CU098_005006	CU098_007987	A0A367IIX0	A0A367J870	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_005006	CU098_009582	A0A367IIX0	A0A367KSR0	Uncharacterized protein.	Uncharacterized protein.	0.674
CU098_006070	CU098_001057	A0A367JSG2	A0A367KW61	Uncharacterized protein.	Uncharacterized protein.	0.780
CU098_006070	CU098_002345	A0A367JSG2	A0A367IS19	Uncharacterized protein.	Metalloenzyme domain-containing protein.	0.648