STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002674Mcp5_PH domain-containing protein. (838 aa)    
Predicted Functional Partners:
CU098_001118
Uncharacterized protein.
   
 0.818
CU098_012254
Uncharacterized protein.
    
 0.750
APH1B
Anterior pharynx defective 1.
    
  0.710
GPLD1
Glycosylphosphatidylinositol specific phospholipase D1.
    
 0.700
CU098_011379
Ncstrn_small domain-containing protein.
    
 0.687
CU098_008021
Ncstrn_small domain-containing protein.
    
 0.687
PSEN1_1
Presenilin-1.
    
 0.686
PSEN1_2
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
    
 0.686
CU098_009358
Uncharacterized protein.
    
 0.686
CU098_003657
Uncharacterized protein.
    
 
 0.683
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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