STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSO2_2Syntaxin. (254 aa)    
Predicted Functional Partners:
SEC9_1
Protein transport protein S9 plasma membrane t-SNARE.
   
 0.971
SEC9_2
Protein transport protein S9 plasma membrane t-SNARE.
   
 0.971
CU098_010622
t-SNARE coiled-coil homology domain-containing protein.
    
 0.965
CU098_011210
t-SNARE coiled-coil homology domain-containing protein.
    
 0.965
BOS1
Protein transport protein bos1.
    
 0.962
CU098_000011
Uncharacterized protein.
    
 0.959
CU098_004085
t-SNARE coiled-coil homology domain-containing protein.
    
 0.954
VAMP7
Vesicle-associated membrane protein; Belongs to the synaptobrevin family.
    
 0.931
CU098_012751
V-SNARE coiled-coil homology domain-containing protein.
    
 0.931
SEC1_2
Vacuolar sorting protein VPS33/slp1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.913
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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