STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC2_1Pre-mRNA-splicing factor. (361 aa)    
Predicted Functional Partners:
CU098_010143
Uncharacterized protein.
    
 0.968
CU098_002193
WD_REPEATS_REGION domain-containing protein.
    
 0.965
CU098_011094
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.965
ISY1
NineTeen Complex (NTC) component.
   
 
 0.963
RBM22
RNA binding motif protein 22.
   
 
0.963
SMD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.963
PRP46
Pre-mRNA-splicing factor prp46.
    
 
 0.961
CU098_006668
WD_REPEATS_REGION domain-containing protein.
    
 
 0.959
BCAS2
Pre-mRNA-splicing factor SPF27.
   
 
 0.956
SYF1_1
Pre-mRNA-splicing factor syf1.
   
 
 0.949
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.