STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS36Vacuolar protein-sorting-associated protein 36. (463 aa)    
Predicted Functional Partners:
SNF8
ESCRT-II subunit protein snf8.
   
 0.998
CU098_006334
Uncharacterized protein; Belongs to the VPS28 family.
    
 0.996
CU098_007615
SB domain-containing protein.
    
 0.994
CU098_002887
Uncharacterized protein.
   
 0.994
CU098_002262
Uncharacterized protein.
   
 0.994
CRP79
Poly(A) binding protein Crp79.
    
 0.989
VPS20
Vacuolar protein sorting-associated protein 20.
    
 0.989
CHMP6
Charged multivesicular body protein 6.
    
 0.988
NEDD8
Nedd8-conjugating enzyme UBE2F.
    
  0.965
CU098_012679
Ubiquitin-like domain-containing protein.
    
  0.965
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.