STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNS1_2Protein pns1; Belongs to the CTL (choline transporter-like) family. (440 aa)    
Predicted Functional Partners:
CU098_012324
Uncharacterized protein.
     
 0.572
CU098_013385
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.572
CU098_003710
Uncharacterized protein.
   
  
 0.565
NDC80
Kinetochore-associated Ndc80 complex subunit ndc80.
      
 0.542
CU098_004350
Rab-GAP TBC domain-containing protein.
 
      0.470
PTC1
Protein phosphatase 2C 1.
 
      0.463
ESA1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
      
 0.431
VMA6
V-type proton ATPase subunit; Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. The active enzyme consists of a catalytic V1 domain attached to an integral membrane V0 proton pore complex. This subunit is a non-integral membrane component of the membrane pore domain and is required for proper assembly of the V0 sector. Might be involved in the regulated assembly of V1 subunits onto the membrane sector or alternatively may prevent the passage of protons through V0 pores; Belongs to the V-ATPase V0D/AC39 subunit family.
      
 0.425
CU098_008697
Uncharacterized protein.
 
      0.409
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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