STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR50U3 small nucleolar RNA-associated protein 18. (540 aa)    
Predicted Functional Partners:
MIS3
Ribosomal RNA assembly protein mis3.
   
 0.998
CU098_002560
Uncharacterized protein.
   
 0.998
WDR75
WD repeat-containing protein 75.
   
 0.998
CU098_004593
WD_REPEATS_REGION domain-containing protein.
   
 0.997
WDR43_2
WD repeat-containing protein 43.
   
 0.997
UTP15_1
SnoRNA-binding rRNA-processing protein.
   
 0.997
UTP13_1
U3 small nucleolar RNA-associated protein 13.
   
 0.997
UTP4_1
U3 small nucleolar RNA-associated protein.
   
 0.997
WDR43_1
WD repeat-containing protein 43.
   
 0.997
NOP56
snoRNP complex protein nop56.
   
 0.997
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.