STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_000355NUC173 domain-containing protein. (1166 aa)    
Predicted Functional Partners:
CU098_010898
Bms1-type G domain-containing protein.
   
 
 0.991
CU098_005966
Bms1-type G domain-containing protein.
   
 
 0.991
CU098_004251
WD_REPEATS_REGION domain-containing protein.
   
 
 0.989
CU098_010213
WD_REPEATS_REGION domain-containing protein.
   
 
 0.989
NOP4
RNA recognition motif-containing protein.
   
 
 0.989
CU098_004218
Uncharacterized protein.
   
 
 0.986
CU098_010983
RRM domain-containing protein.
   
 
 0.985
NOP14_2
Nucleolar complex protein 14.
   
 
 0.984
NOP14_1
Nucleolar complex protein 14.
   
 
 0.984
MIS3
Ribosomal RNA assembly protein mis3.
   
 
 0.978
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.