STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPG14Exopolygalacturonase rpg14; Belongs to the glycosyl hydrolase 28 family. (318 aa)    
Predicted Functional Partners:
PHO81_2
Phosphate system positive regulatory protein pho81.
    
 0.759
PHO81_1
Phosphate system positive regulatory protein pho81.
    
 0.759
GDE1_2
Glycerophosphocholine phosphodiesterase.
    
  0.748
GDE1_1
Glycerophosphocholine phosphodiesterase.
    
  0.748
CU098_004597
Uncharacterized protein.
    
 0.704
CU098_001767
Pectinesterase domain-containing protein.
  
  
 0.703
CU098_007124
Pectinesterase domain-containing protein.
  
  
 0.702
CRP79
Poly(A) binding protein Crp79.
    
  0.700
CU098_010721
Pectinesterase domain-containing protein.
  
  
 0.698
TOM40
Translocase of outer mitochondrial membrane.
   
 0.675
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.