STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008837Nudix hydrolase domain-containing protein. (213 aa)    
Predicted Functional Partners:
CU098_008567
HIT domain-containing protein.
   
 0.841
CU098_003032
Uncharacterized protein.
    
 0.810
DCP1B_1
mRNA-decapping enzyme 1B.
    
 0.788
DCP1B_2
mRNA-decapping enzyme 1B.
    
 0.788
NUDT15
Nudix hydrolase 15, mitochondrial.
  
 
 0.742
PGM3
Phosphoglucomutase-3; Belongs to the phosphohexose mutase family.
   
  0.741
CU098_010222
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.736
PGM2_1
Phosphoglucomutase-2; Belongs to the phosphohexose mutase family.
   
 
 0.733
PGM2_2
Phosphoglucomutase-2; Belongs to the phosphohexose mutase family.
   
 
 0.733
EDC3_1
Enhancer of mRNA decapping.
  
 0.727
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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