STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_011493Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
CU098_000994
CID domain-containing protein.
   
 
 0.949
FIP1L1
Pre-mRNA 3-end-processing factor fip1l1.
   
 0.942
SMD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.941
CU098_011094
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.939
CU098_000614
RRM domain-containing protein.
   
 0.927
CU098_003446
Uncharacterized protein.
    
 0.925
CU098_012456
Uncharacterized protein.
    
 0.923
CU098_008826
Uncharacterized protein.
   
 0.896
CU098_000915
RRM domain-containing protein.
   
 0.887
CU098_000588
CID domain-containing protein.
   
 0.873
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.