STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007364Uncharacterized protein. (689 aa)    
Predicted Functional Partners:
CU098_011875
Uncharacterized protein.
   
 0.838
CU098_011915
Mo-co_dimer domain-containing protein.
   
 
 0.654
CU098_001853
MOSC domain-containing protein.
   
 
 0.605
CU098_007495
Malate dehydrogenase.
     
 0.602
PDB1
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
  0.584
PDA1
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 
  0.583
CU098_002883
Mo-co_dimer domain-containing protein.
   
 
 0.520
MCR1_1
NADH-cytochrome b5 reductase.
   
 0.512
CU098_001538
NAD_binding_1 domain-containing protein.
   
 0.512
CU098_007757
Uncharacterized protein.
   
 0.512
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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