STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_007940Rab-GAP TBC domain-containing protein. (762 aa)    
Predicted Functional Partners:
YPT3
Ras-protein ypt3.
    
 0.674
RAB11A_1
Ras-protein Rab-11A.
    
 0.674
RAB11A_2
Ras-protein Rab-11A.
    
 0.674
CU098_011670
Uncharacterized protein.
    
 0.674
RAB2A
Ras-protein Rab-2A.
    
 0.662
SEC4
GTP-binding protein.
    
  0.506
NCA2
Nuclear control of ATPase protein 2.
    
  0.506
CU098_005230
Uncharacterized protein.
    
  0.480
CU098_010570
Uncharacterized protein.
    
  0.480
CU098_013838
Uncharacterized protein.
    
  0.480
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.