STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_010125ANK_REP_REGION domain-containing protein. (578 aa)    
Predicted Functional Partners:
GDE1_2
Glycerophosphocholine phosphodiesterase.
    
 0.764
GDE1_1
Glycerophosphocholine phosphodiesterase.
    
 0.764
CU098_002835
Uncharacterized protein.
    
 0.722
CU098_011641
TRAF-type domain-containing protein.
    
 0.722
CU098_001964
Uncharacterized protein.
    
 0.695
CU098_010616
Uncharacterized protein.
    
 0.695
CU098_011875
Uncharacterized protein.
   
  0.675
CU098_003770
Uncharacterized protein.
   
 0.671
CU098_011166
Uncharacterized protein.
   
 0.671
DFR1
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 0.656
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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