Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDB4 | CU098_001016 | A0A367INE4 | A0A367KNG1 | Curved DNA-binding protein (42 kDa protein). | CP-type G domain-containing protein. | 0.940 |
CDB4 | CU098_002644 | A0A367INE4 | A0A367JBF5 | Curved DNA-binding protein (42 kDa protein). | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.940 |
CDB4 | CU098_009986 | A0A367INE4 | A0A367KJ56 | Curved DNA-binding protein (42 kDa protein). | Uncharacterized protein. | 0.964 |
CDB4 | CU098_012055 | A0A367INE4 | A0A367KQ08 | Curved DNA-binding protein (42 kDa protein). | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.960 |
CDB4 | CU098_012125 | A0A367INE4 | A0A367KLZ8 | Curved DNA-binding protein (42 kDa protein). | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.960 |
CDB4 | RPL7 | A0A367INE4 | A0A367JZD7 | Curved DNA-binding protein (42 kDa protein). | 60S ribosomal protein L7. | 0.982 |
CDB4 | TIF6_1 | A0A367INE4 | A0A367INR0 | Curved DNA-binding protein (42 kDa protein). | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. | 0.932 |
CDB4 | TIF6_2 | A0A367INE4 | A0A367KUE0 | Curved DNA-binding protein (42 kDa protein). | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.932 |
CU098_000160 | CU098_001016 | A0A367IUN4 | A0A367KNG1 | Peptidase_M24 domain-containing protein. | CP-type G domain-containing protein. | 0.940 |
CU098_000160 | CU098_002644 | A0A367IUN4 | A0A367JBF5 | Peptidase_M24 domain-containing protein. | Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily. | 0.940 |
CU098_000160 | CU098_009986 | A0A367IUN4 | A0A367KJ56 | Peptidase_M24 domain-containing protein. | Uncharacterized protein. | 0.964 |
CU098_000160 | CU098_012055 | A0A367IUN4 | A0A367KQ08 | Peptidase_M24 domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.960 |
CU098_000160 | CU098_012125 | A0A367IUN4 | A0A367KLZ8 | Peptidase_M24 domain-containing protein. | 60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. | 0.960 |
CU098_000160 | RPL7 | A0A367IUN4 | A0A367JZD7 | Peptidase_M24 domain-containing protein. | 60S ribosomal protein L7. | 0.982 |
CU098_000160 | TIF6_1 | A0A367IUN4 | A0A367INR0 | Peptidase_M24 domain-containing protein. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. | 0.932 |
CU098_000160 | TIF6_2 | A0A367IUN4 | A0A367KUE0 | Peptidase_M24 domain-containing protein. | Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. | 0.932 |
CU098_001016 | CDB4 | A0A367KNG1 | A0A367INE4 | CP-type G domain-containing protein. | Curved DNA-binding protein (42 kDa protein). | 0.940 |
CU098_001016 | CU098_000160 | A0A367KNG1 | A0A367IUN4 | CP-type G domain-containing protein. | Peptidase_M24 domain-containing protein. | 0.940 |
CU098_001016 | CU098_007556 | A0A367KNG1 | A0A367KUJ4 | CP-type G domain-containing protein. | Peptidase_M24 domain-containing protein. | 0.940 |
CU098_001016 | CU098_009986 | A0A367KNG1 | A0A367KJ56 | CP-type G domain-containing protein. | Uncharacterized protein. | 0.976 |
page 1 of 5