Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CU098_002448 | CU098_004361 | A0A367KKT2 | A0A367IKY0 | TFIIE beta domain-containing protein. | MAT1 domain-containing protein. | 0.997 |
| CU098_002448 | CU098_012387 | A0A367KKT2 | A0A367KWQ9 | TFIIE beta domain-containing protein. | Uncharacterized protein. | 0.989 |
| CU098_002448 | KIN28 | A0A367KKT2 | A0A367IPU5 | TFIIE beta domain-containing protein. | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | 0.997 |
| CU098_002448 | RPB2 | A0A367KKT2 | A0A367KKW9 | TFIIE beta domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| CU098_002448 | RPB3 | A0A367KKT2 | A0A367KHD3 | TFIIE beta domain-containing protein. | 45 kDa subunit of RNA polymerase II. | 0.997 |
| CU098_002448 | RPB5 | A0A367KKT2 | A0A367ITU0 | TFIIE beta domain-containing protein. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.996 |
| CU098_002448 | RPB6 | A0A367KKT2 | A0A367KRH4 | TFIIE beta domain-containing protein. | DNA-directed RNA polymerases I II and III subunit RPABC2. | 0.996 |
| CU098_002448 | RPB9 | A0A367KKT2 | A0A367KIW8 | TFIIE beta domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.997 |
| CU098_002448 | TFB1 | A0A367KKT2 | A0A367KWR4 | TFIIE beta domain-containing protein. | RNA polymerase II transcription factor B subunit 1. | 0.996 |
| CU098_002448 | TFB2 | A0A367KKT2 | A0A367KJM7 | TFIIE beta domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.995 |
| CU098_004361 | CU098_002448 | A0A367IKY0 | A0A367KKT2 | MAT1 domain-containing protein. | TFIIE beta domain-containing protein. | 0.997 |
| CU098_004361 | CU098_012387 | A0A367IKY0 | A0A367KWQ9 | MAT1 domain-containing protein. | Uncharacterized protein. | 0.992 |
| CU098_004361 | KIN28 | A0A367IKY0 | A0A367IPU5 | MAT1 domain-containing protein. | TFIIH complex serine/threonine-protein kinase subunit kin28; Belongs to the protein kinase superfamily. | 0.998 |
| CU098_004361 | RPB2 | A0A367IKY0 | A0A367KKW9 | MAT1 domain-containing protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
| CU098_004361 | RPB3 | A0A367IKY0 | A0A367KHD3 | MAT1 domain-containing protein. | 45 kDa subunit of RNA polymerase II. | 0.996 |
| CU098_004361 | RPB5 | A0A367IKY0 | A0A367ITU0 | MAT1 domain-containing protein. | DNA-directed RNA polymerases II 24 kDa polypeptide (RNA polymerase II subunit 5). | 0.995 |
| CU098_004361 | RPB6 | A0A367IKY0 | A0A367KRH4 | MAT1 domain-containing protein. | DNA-directed RNA polymerases I II and III subunit RPABC2. | 0.996 |
| CU098_004361 | RPB9 | A0A367IKY0 | A0A367KIW8 | MAT1 domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.996 |
| CU098_004361 | TFB1 | A0A367IKY0 | A0A367KWR4 | MAT1 domain-containing protein. | RNA polymerase II transcription factor B subunit 1. | 0.997 |
| CU098_004361 | TFB2 | A0A367IKY0 | A0A367KJM7 | MAT1 domain-containing protein. | RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. | 0.997 |
page 1 of 6