STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_002152Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
UCHL3_2
Ubiquitin carboxyl-terminal hydrolase.
    
 0.750
UCHL3_1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.750
GNB1_1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
   
 0.739
GPB1_1
Guanine nucleotide-binding protein subunit beta 1.
   
 0.739
GNB1_2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
   
 0.739
GPB1_2
Guanine nucleotide-binding protein subunit beta 1.
   
 0.739
RnGPB2
Guanine nucleotide-binding protein subunit beta 1.
   
 0.739
CU098_001819
Glyco_hydro_20 domain-containing protein.
     
 0.733
CU098_005093
Beta-hexosaminidase.
     
 0.733
CU098_012409
Beta-hexosaminidase.
     
 0.733
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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