STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008729Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1032 aa)    
Predicted Functional Partners:
PHF5A
PHD finger-like domain-containing protein 5A.
     
  0.594
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.558
ESA1
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
  0.558
VMA2
Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family.
   
 0.555
PMC1_2
Plasma membrane calcium.
  
 
0.529
CU098_001564
Cation_ATPase_C domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.526
CU098_000579
Cation_ATPase_C domain-containing protein.
  
 
0.524
SF3B1_1
Splicing factor 3B subunit 1.
   
 
  0.523
SF3B1_2
Splicing factor 3B subunit 1.
   
 
  0.523
PMC1_1
Plasma membrane calcium.
  
 
0.519
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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