STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001957Uncharacterized protein. (267 aa)    
Predicted Functional Partners:
SOD2_1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.961
SOD2_2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.961
CU098_003874
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.958
CU098_008110
Uncharacterized protein.
   
 
 0.958
CU098_001515
Rhodanese domain-containing protein.
   
   0.954
MRPL23
54S ribosomal protein L23, mitochondrial; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.947
MRPL3
54S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.946
CU098_007946
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.945
MRPL51
39S ribosomal protein L51, mitochondrial.
    
   0.939
ERT1_5
Transcriptional regulator of nonfermentable carbon utilization.
   
   0.939
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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