STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_008133Uncharacterized protein. (462 aa)    
Predicted Functional Partners:
CU098_006332
Uncharacterized protein.
    
 0.972
CU098_001689
MI domain-containing protein.
   
 0.888
CU098_005843
eIF_4G1 domain-containing protein.
   
 0.888
CU098_001421
MIF4G domain-containing protein.
   
 0.888
CU098_002033
MIF4G domain-containing protein.
   
 0.888
TIF1_2
Translation initiation factor eIF4A.
   
 0.879
TIF1_1
Translation initiation factor eIF4A; Belongs to the DEAD box helicase family.
   
 0.879
FAL1_1
RNA helicase; Belongs to the DEAD box helicase family.
   
 0.795
CU098_003108
Uncharacterized protein.
   
 0.795
FAL1_2
RNA helicase; Belongs to the DEAD box helicase family.
   
 0.795
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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