STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC2_1Ubiquitin-conjugating enzyme E2 2; Belongs to the ubiquitin-conjugating enzyme family. (146 aa)    
Predicted Functional Partners:
CRP79
Poly(A) binding protein Crp79.
   
 0.989
PTR3_1
SPS-sensor component ptr3; Belongs to the ubiquitin-activating E1 family.
   
 0.988
PTR3_2
SPS-sensor component ptr3; Belongs to the ubiquitin-activating E1 family.
   
 0.988
POL30
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.983
NEDD8
Nedd8-conjugating enzyme UBE2F.
    
 0.981
CU098_012679
Ubiquitin-like domain-containing protein.
    
 0.981
CU098_002395
E3 ubiquitin protein ligase.
    
 0.980
BRE1_1
E3 ubiquitin protein ligase.
    
 0.980
CU098_003381
E3 ubiquitin protein ligase.
    
 0.980
BRE1_2
E3 ubiquitin protein ligase.
    
 0.980
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.