STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_011953Uncharacterized protein; Belongs to the protein kinase superfamily. (497 aa)    
Predicted Functional Partners:
CU098_007328
Uncharacterized protein.
    
 0.791
PDPK1_2
3-phosphoinositide dependent protein kinase-1.
  
 
0.739
PDPK1_1
3-phosphoinositide dependent protein kinase-1.
  
 
0.738
CU098_004610
Uncharacterized protein.
    
 0.733
CU098_008578
WD_REPEATS_REGION domain-containing protein.
    
 0.733
CU098_006152
WD_REPEATS_REGION domain-containing protein.
    
 0.733
CU098_010819
Uncharacterized protein.
    
 0.733
PKH3
Pkb-activating kinase-like protein.
  
 
0.732
CU098_013919
Uncharacterized protein.
    
 0.702
TSC2_1
Tuberous sclerosis 2-like protein.
    
 0.688
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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