STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_010576Uncharacterized protein. (677 aa)    
Predicted Functional Partners:
CU098_004757
Uncharacterized protein.
   
 
 0.806
CU098_000878
RNB domain-containing protein.
   
 
 0.806
CU098_000228
Uncharacterized protein.
   
 
 0.806
VPS26BL
Vacuolar protein sorting-associated protein 26B-like protein.
     
 0.621
DIS3L_1
DIS3 mitotic control.
   
 
 0.567
CU098_003591
Uncharacterized protein.
   
 
 0.567
DIS3L_2
DIS3 mitotic control.
   
 
 0.567
DIS3_1
Exosome catalytic subunit dis3.
   
 
 0.567
CU098_004064
RNB domain-containing protein.
   
 
 0.567
CU098_006193
A to I editase domain-containing protein.
   
 
 0.567
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.