STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_011506Glutamate decarboxylase; Belongs to the group II decarboxylase family. (506 aa)    
Predicted Functional Partners:
PAN6
Pantothenate synthase.
  
 
 0.806
CU098_007675
Uncharacterized protein.
    
 0.797
CU098_003260
acidPPc domain-containing protein.
    
 0.797
UGA2
Succinate-semialdehyde dehydrogenase.
   
 0.795
TRP5_1
Tryptophan synthase.
    
 0.784
TRP5_2
Tryptophan synthase.
    
 0.784
TRP5_3
Tryptophan synthase.
    
 0.784
HIS4_1
Trifunctional histidinol dehydrogenase.
    
 0.780
HIS4_2
Histidine biosynthesis trifunctional protein.
    
 0.780
HIS4_3
Trifunctional histidinol dehydrogenase; Belongs to the histidinol dehydrogenase family.
    
 0.780
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.