Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CU098_001574 | CU098_004720 | A0A367KR95 | A0A367KSL4 | WD_REPEATS_REGION domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.665 |
CU098_001574 | CU098_010431 | A0A367KR95 | A0A367K9S9 | WD_REPEATS_REGION domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.665 |
CU098_001574 | CU098_012787 | A0A367KR95 | A0A367KPP7 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.954 |
CU098_001574 | EXO1 | A0A367KR95 | A0A367KDW9 | WD_REPEATS_REGION domain-containing protein. | Rad2 nuclease. | 0.914 |
CU098_001574 | FEN1_1 | A0A367KR95 | A0A367KNY3 | WD_REPEATS_REGION domain-containing protein. | Elongation of fatty acids protein 2. | 0.680 |
CU098_001574 | RFA1_1 | A0A367KR95 | A0A367KQX5 | WD_REPEATS_REGION domain-containing protein. | Replication factor A protein 1. | 0.546 |
CU098_001574 | RFA1_2 | A0A367KR95 | A0A367KWW3 | WD_REPEATS_REGION domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.546 |
CU098_001574 | RFA2 | A0A367KR95 | A0A367KQA5 | WD_REPEATS_REGION domain-containing protein. | Replication factor A protein 2. | 0.431 |
CU098_001574 | SGS1 | A0A367KR95 | A0A367KW60 | WD_REPEATS_REGION domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.714 |
CU098_004720 | CU098_001574 | A0A367KSL4 | A0A367KR95 | 3'-5' exonuclease domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.665 |
CU098_004720 | CU098_006151 | A0A367KSL4 | A0A367K3C7 | 3'-5' exonuclease domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.665 |
CU098_004720 | CU098_010431 | A0A367KSL4 | A0A367K9S9 | 3'-5' exonuclease domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.964 |
CU098_004720 | CU098_012787 | A0A367KSL4 | A0A367KPP7 | 3'-5' exonuclease domain-containing protein. | Uncharacterized protein. | 0.983 |
CU098_004720 | EXO1 | A0A367KSL4 | A0A367KDW9 | 3'-5' exonuclease domain-containing protein. | Rad2 nuclease. | 0.998 |
CU098_004720 | FEN1_1 | A0A367KSL4 | A0A367KNY3 | 3'-5' exonuclease domain-containing protein. | Elongation of fatty acids protein 2. | 0.997 |
CU098_004720 | RFA1_1 | A0A367KSL4 | A0A367KQX5 | 3'-5' exonuclease domain-containing protein. | Replication factor A protein 1. | 0.998 |
CU098_004720 | RFA1_2 | A0A367KSL4 | A0A367KWW3 | 3'-5' exonuclease domain-containing protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.998 |
CU098_004720 | RFA2 | A0A367KSL4 | A0A367KQA5 | 3'-5' exonuclease domain-containing protein. | Replication factor A protein 2. | 0.997 |
CU098_004720 | SGS1 | A0A367KSL4 | A0A367KW60 | 3'-5' exonuclease domain-containing protein. | ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. | 0.675 |
CU098_006151 | CU098_004720 | A0A367K3C7 | A0A367KSL4 | WD_REPEATS_REGION domain-containing protein. | 3'-5' exonuclease domain-containing protein. | 0.665 |
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