STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_012136Uncharacterized protein. (885 aa)    
Predicted Functional Partners:
CU098_012617
SANT domain-containing protein.
 
 
   0.779
EXO1
Rad2 nuclease.
    
 
 0.722
CU098_011617
Helicase ATP-binding domain-containing protein.
  
   0.676
CU098_001944
Uncharacterized protein.
  
   0.673
CU098_003159
Helicase C-terminal domain-containing protein.
  
   0.667
CU098_001389
Helicase C-terminal domain-containing protein.
  
   0.664
CU098_000260
Uncharacterized protein.
  
   0.655
SGS1
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 
 0.642
MSH2_3
MutS-like protein.
   
 
 0.639
MSH2_2
MutS-like protein.
   
 
 0.639
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.