STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_013266Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
TIM22
Mitochondrial import inner membrane translocase subunit tim22.
    
 0.666
TIM10
Protein transporter tim10.
   
 0.565
SDH4_2
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.518
SDH4_1
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.
    
 0.518
TIM9_2
Protein transporter tim9.
   
 
 0.444
TIM9_1
Protein transporter tim9.
   
 
 0.444
SDH3
Cytochrome b subunit of succinate dehydrogenase, Sdh3p.
    
 
 0.424
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.