Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BDP1 | BRF1 | A0A367K5K7 | A0A367KND2 | Transcription factor TFIIIB component B. | Transcription factor TFIIIB subunit brf1. | 0.989 |
BDP1 | CU098_003678 | A0A367K5K7 | A0A367IPH6 | Transcription factor TFIIIB component B. | BRF1 domain-containing protein. | 0.989 |
BDP1 | POLR3D | A0A367K5K7 | A0A367ILW7 | Transcription factor TFIIIB component B. | DNA-directed RNA polymerase III subunit RPC4. | 0.995 |
BDP1 | TFC4_2 | A0A367K5K7 | A0A367KQS5 | Transcription factor TFIIIB component B. | Transcription factor TFIIIC subunit tfc4. | 0.962 |
BRF1 | BDP1 | A0A367KND2 | A0A367K5K7 | Transcription factor TFIIIB subunit brf1. | Transcription factor TFIIIB component B. | 0.989 |
BRF1 | POLR3D | A0A367KND2 | A0A367ILW7 | Transcription factor TFIIIB subunit brf1. | DNA-directed RNA polymerase III subunit RPC4. | 0.967 |
BRF1 | TFC4_2 | A0A367KND2 | A0A367KQS5 | Transcription factor TFIIIB subunit brf1. | Transcription factor TFIIIC subunit tfc4. | 0.981 |
CLP1 | CPSF1_1 | A0A367J0C2 | A0A367KMI8 | Cleavage polyadenylation factor subunit clp1. | Cleavage and polyadenylation specificity factor subunit 1. | 0.881 |
CLP1 | CPSF2_1 | A0A367J0C2 | A0A367ITW4 | Cleavage polyadenylation factor subunit clp1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.925 |
CLP1 | CPSF2_2 | A0A367J0C2 | A0A367IXV4 | Cleavage polyadenylation factor subunit clp1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.925 |
CLP1 | CU098_003446 | A0A367J0C2 | A0A367IIW3 | Cleavage polyadenylation factor subunit clp1. | Uncharacterized protein. | 0.905 |
CLP1 | CU098_005008 | A0A367J0C2 | A0A367KIB0 | Cleavage polyadenylation factor subunit clp1. | RRM domain-containing protein. | 0.996 |
CLP1 | TFC4_2 | A0A367J0C2 | A0A367KQS5 | Cleavage polyadenylation factor subunit clp1. | Transcription factor TFIIIC subunit tfc4. | 0.944 |
CPSF1_1 | CLP1 | A0A367KMI8 | A0A367J0C2 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage polyadenylation factor subunit clp1. | 0.881 |
CPSF1_1 | CPSF2_1 | A0A367KMI8 | A0A367ITW4 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.984 |
CPSF1_1 | CPSF2_2 | A0A367KMI8 | A0A367IXV4 | Cleavage and polyadenylation specificity factor subunit 1. | Cleavage and polyadenylation specificity factor subunit 2. | 0.984 |
CPSF1_1 | CU098_003446 | A0A367KMI8 | A0A367IIW3 | Cleavage and polyadenylation specificity factor subunit 1. | Uncharacterized protein. | 0.989 |
CPSF1_1 | CU098_005008 | A0A367KMI8 | A0A367KIB0 | Cleavage and polyadenylation specificity factor subunit 1. | RRM domain-containing protein. | 0.988 |
CPSF1_1 | TFC4_2 | A0A367KMI8 | A0A367KQS5 | Cleavage and polyadenylation specificity factor subunit 1. | Transcription factor TFIIIC subunit tfc4. | 0.920 |
CPSF2_1 | CLP1 | A0A367ITW4 | A0A367J0C2 | Cleavage and polyadenylation specificity factor subunit 2. | Cleavage polyadenylation factor subunit clp1. | 0.925 |
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