STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_001427Uncharacterized protein. (771 aa)    
Predicted Functional Partners:
VAM6_2
Vacuolar morphoproteinsis protein 6.
   
 0.984
VAM6_1
Vacuolar morphoproteinsis protein 6.
   
 0.984
VPS41_1
Vacuolar protein sorting-associated protein 41.
   
 0.983
VPS41_2
Vacuolar protein sorting-associated protein 41.
   
 0.983
CU098_005348
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.983
CU098_001101
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.983
CU098_002029
Uncharacterized protein.
    
 0.982
CU098_008663
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 0.982
TGFBRAP1
Transforming growth factor, beta receptor associated protein 1.
   
 0.981
CU098_011475
CNH domain-containing protein.
   
 0.981
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.