STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_013333Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
CU098_010965
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.941
ERG10
Erg10, acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.917
POT1_2
3-ketoacyl-CoA thiolase with broad chain length specificity.
  
 0.905
POT1_1
3-ketoacyl-CoA thiolase with broad chain length specificity.
  
 0.905
POT1_3
3-ketoacyl-CoA thiolase with broad chain length specificity; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.905
POT1_4
3-ketoacyl-CoA thiolase with broad chain length specificity; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.905
CU098_008908
Uncharacterized protein.
  
 0.886
CU098_006412
SCP2 domain-containing protein.
  
 0.880
SCP2_1
Sterol carrier protein 2.
  
 0.880
ERT1_5
Transcriptional regulator of nonfermentable carbon utilization.
  
 0.844
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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