STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEG7_4Serine protease. (977 aa)    
Predicted Functional Partners:
RPN1
Proteasome regulatory particle base subunit.
    
 0.809
PSMD6
26S proteasome non-ATPase regulatory subunit 6.
    
 0.792
RPN9
26S proteasome regulatory subunit.
    
 0.788
CU098_006412
SCP2 domain-containing protein.
    
  0.787
SCP2_1
Sterol carrier protein 2.
    
  0.787
PSMD12_1
26S proteasome non-ATPase regulatory subunit 12.
    
 0.753
PSMD12_2
26S proteasome non-ATPase regulatory subunit 12.
    
 0.753
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
    
  0.747
CU098_006054
VWFA domain-containing protein.
   
 0.734
CU098_008945
VWFA domain-containing protein.
   
 0.734
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.