STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_010695Uncharacterized protein. (1643 aa)    
Predicted Functional Partners:
CU098_004608
Uncharacterized protein.
   
 
 0.929
CU098_001184
Dopey_N domain-containing protein.
   
 
 0.929
CU098_013294
Dopey_N domain-containing protein.
   
 
 0.929
ARL1
Arf GTPase arl1.
    
 
 0.826
CU098_008768
RIC1 domain-containing protein.
   
 
 0.626
CU098_013644
Uncharacterized protein.
    
 
 0.604
NEO1
Putative aminophospholipid-translocase.
   
 
 0.600
CU098_006885
Uncharacterized protein.
   
 
 0.600
CU098_002803
Uncharacterized protein.
   
 
 0.600
SEC7_1
Guanine nucleotide exchange protein for ADP-robosylation factor.
   
 
 0.473
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.