STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CU098_006164Uncharacterized protein; Belongs to the precorrin methyltransferase family. (524 aa)    
Predicted Functional Partners:
CU098_011879
Uncharacterized protein.
 
 0.991
CU098_006715
Uncharacterized protein.
 
 0.990
HEM2_2
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.913
HEM2_1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 
 0.913
CU098_001135
Uncharacterized protein.
  
 
 0.892
CU098_002541
Flavodoxin-like domain-containing protein.
  
 
 0.892
CU098_001577
Flavodoxin-like domain-containing protein.
  
 
 0.892
CU098_011771
Flavodoxin-like domain-containing protein.
  
 
 0.892
CU098_011303
FAD-binding FR-type domain-containing protein.
 
 
 0.879
MET14
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
  
 0.872
Your Current Organism:
Rhizopus stolonifer
NCBI taxonomy Id: 4846
Other names: Mucor stolonifer, R. stolonifer, Rhizopus nigricans
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